Freelance nerd, writer, environment builder. Did Plasma Physics.

EMOD Setup

Institute for Disease Modeling

Required packages, from Link libmpich10 paths to current versions of the library—maybe this will work.

apt-get -qq update
apt-get install libboost-mpi-dev scons mpich libmpich-dev xauth git-lfs pigz
conda install pyyaml xlrd

cd /usr/lib/x86_64-linux-gnu
ln -fs
ln -fs
ln -fs
ln -fs

Clone EMOD, and untar the input data saved in the Appendix.

git clone
git checkout v2.18.0

cd /
pigz -dc EMOD-InputData.tar.gz | tar -xf -

Link input data.

ln -s /EMOD-InputData /EMOD/InputData

Download the executable file, set +x.

cd /usr/local/bin
chmod +x Eradication